%FILES%
usr/
usr/bin/
usr/bin/alfsplit
usr/bin/copy_db
usr/bin/copy_reads
usr/bin/create_emboss_files
usr/bin/eba
usr/bin/find_renz
usr/bin/gap4
usr/bin/gap5
usr/bin/gap5_cmd
usr/bin/getABISampleName
usr/bin/getABIcomment
usr/bin/getABIdate
usr/bin/getABIfield
usr/bin/get_scf_field
usr/bin/hetins
usr/bin/init_exp
usr/bin/make_weights
usr/bin/mutscan
usr/bin/polyA_clip
usr/bin/prefinish
usr/bin/pregap4
usr/bin/qclip
usr/bin/screen_seq
usr/bin/spin
usr/bin/staden_convert
usr/bin/stash
usr/bin/stops
usr/bin/tg_index
usr/bin/tg_index.bin
usr/bin/tracediff
usr/bin/trev
usr/bin/vector_clip
usr/lib/
usr/lib/staden/
usr/lib/staden/libcopy_reads.so
usr/lib/staden/libg.so
usr/lib/staden/libgap.so
usr/lib/staden/libgap5.so
usr/lib/staden/libhaplo.so
usr/lib/staden/libmisc.so
usr/lib/staden/libmutlib.so
usr/lib/staden/libprefinish.so
usr/lib/staden/libprimer3.so
usr/lib/staden/libseq_utils.so
usr/lib/staden/libspin.so
usr/lib/staden/libtext_utils.so
usr/lib/staden/libtk_utils.so
usr/share/
usr/share/applications/
usr/share/applications/gap4.desktop
usr/share/applications/gap5.desktop
usr/share/applications/pregap4.desktop
usr/share/applications/spin.desktop
usr/share/applications/trev.desktop
usr/share/icons/
usr/share/icons/staden.png
usr/share/staden/
usr/share/staden/etc/
usr/share/staden/etc/2bars_h.bmp
usr/share/staden/etc/2bars_v.bmp
usr/share/staden/etc/GTAGDB
usr/share/staden/etc/NOTEDB
usr/share/staden/etc/RENZYM.4
usr/share/staden/etc/RENZYM.6
usr/share/staden/etc/RENZYM.ALL
usr/share/staden/etc/align_lib_nuc_matrix
usr/share/staden/etc/alus/
usr/share/staden/etc/alus/ALUA
usr/share/staden/etc/alus/HUMA1ATP
usr/share/staden/etc/alus/HUMACHRA7
usr/share/staden/etc/alus/HUMADAG
usr/share/staden/etc/alus/HUMADAG-10
usr/share/staden/etc/alus/HUMADAG-11
usr/share/staden/etc/alus/HUMADAG-12
usr/share/staden/etc/alus/HUMADAG-13
usr/share/staden/etc/alus/HUMADAG-14
usr/share/staden/etc/alus/HUMADAG-15
usr/share/staden/etc/alus/HUMADAG-16
usr/share/staden/etc/alus/HUMADAG-17
usr/share/staden/etc/alus/HUMADAG-18
usr/share/staden/etc/alus/HUMADAG-2
usr/share/staden/etc/alus/HUMADAG-3
usr/share/staden/etc/alus/HUMADAG-4
usr/share/staden/etc/alus/HUMADAG-5
usr/share/staden/etc/alus/HUMADAG-6
usr/share/staden/etc/alus/HUMADAG-7
usr/share/staden/etc/alus/HUMADAG-8
usr/share/staden/etc/alus/HUMADAG-9
usr/share/staden/etc/alus/HUMAGG
usr/share/staden/etc/alus/HUMALBG
usr/share/staden/etc/alus/HUMALBG-2
usr/share/staden/etc/alus/HUMANFA
usr/share/staden/etc/alus/HUMANFA-2
usr/share/staden/etc/alus/HUMAPOAI1
usr/share/staden/etc/alus/HUMAPOAI1-2
usr/share/staden/etc/alus/HUMAPOAII
usr/share/staden/etc/alus/HUMAPOAII-2
usr/share/staden/etc/alus/HUMAPOCII
usr/share/staden/etc/alus/HUMAPOE4
usr/share/staden/etc/alus/HUMAPOE4-2
usr/share/staden/etc/alus/HUMAPOE4-3
usr/share/staden/etc/alus/HUMAPOE4-4
usr/share/staden/etc/alus/HUMBLYM1
usr/share/staden/etc/alus/HUMC1A21
usr/share/staden/etc/alus/HUMC1A23
usr/share/staden/etc/alus/HUMC1AIN1
usr/share/staden/etc/alus/HUMERPA
usr/share/staden/etc/alus/HUMFIXG
usr/share/staden/etc/alus/HUMFIXG-2
usr/share/staden/etc/alus/HUMFIXG-3
usr/share/staden/etc/alus/HUMFIXG-4
usr/share/staden/etc/alus/HUMFOL5
usr/share/staden/etc/alus/HUMFOL5-2
usr/share/staden/etc/alus/HUMGAST2
usr/share/staden/etc/alus/HUMGHV
usr/share/staden/etc/alus/HUMHBA4
usr/share/staden/etc/alus/HUMHBA4-2
usr/share/staden/etc/alus/HUMHBA4-3
usr/share/staden/etc/alus/HUMHBBRT
usr/share/staden/etc/alus/HUMHBBRT-2
usr/share/staden/etc/alus/HUMIFNB3
usr/share/staden/etc/alus/HUMIFNB3-2
usr/share/staden/etc/alus/HUMIFNB3-3
usr/share/staden/etc/alus/HUMIFNB3-4
usr/share/staden/etc/alus/HUMIFNB3-5
usr/share/staden/etc/alus/HUMIL2R8
usr/share/staden/etc/alus/HUMINS2
usr/share/staden/etc/alus/HUMLDLIVS
usr/share/staden/etc/alus/HUMLDLR
usr/share/staden/etc/alus/HUMLDLR-2
usr/share/staden/etc/alus/HUMMHDC3B
usr/share/staden/etc/alus/HUMMHDRB3
usr/share/staden/etc/alus/HUMMHDRB3-2
usr/share/staden/etc/alus/HUMMYCRT
usr/share/staden/etc/alus/HUMNGFB
usr/share/staden/etc/alus/HUMPOMC
usr/share/staden/etc/alus/HUMPOMC-2
usr/share/staden/etc/alus/HUMPOMC1
usr/share/staden/etc/alus/HUMPOMC2
usr/share/staden/etc/alus/HUMPOMC6
usr/share/staden/etc/alus/HUMRSA1
usr/share/staden/etc/alus/HUMRSA16
usr/share/staden/etc/alus/HUMRSA27
usr/share/staden/etc/alus/HUMRSAB11
usr/share/staden/etc/alus/HUMRSAB13
usr/share/staden/etc/alus/HUMRSAB19
usr/share/staden/etc/alus/HUMRSAB2
usr/share/staden/etc/alus/HUMRSAB6
usr/share/staden/etc/alus/HUMRSAB8
usr/share/staden/etc/alus/HUMRSAOLD
usr/share/staden/etc/alus/HUMRSAP3
usr/share/staden/etc/alus/HUMRSKA1
usr/share/staden/etc/alus/HUMRSKPA1
usr/share/staden/etc/alus/HUMSLJT1
usr/share/staden/etc/alus/HUMTBB5
usr/share/staden/etc/alus/HUMTBB5-2
usr/share/staden/etc/alus/HUMTBB5-3
usr/share/staden/etc/alus/HUMTBB5-4
usr/share/staden/etc/alus/HUMTBB5-5
usr/share/staden/etc/alus/HUMTBB5-6
usr/share/staden/etc/alus/HUMTBB5-7
usr/share/staden/etc/alus/HUMTBBM40
usr/share/staden/etc/alus/HUMTHBNB
usr/share/staden/etc/alus/HUMTHBNB-2
usr/share/staden/etc/alus/HUMTHBNB-3
usr/share/staden/etc/alus/HUMTPA
usr/share/staden/etc/alus/HUMTPA-10
usr/share/staden/etc/alus/HUMTPA-11
usr/share/staden/etc/alus/HUMTPA-12
usr/share/staden/etc/alus/HUMTPA-13
usr/share/staden/etc/alus/HUMTPA-14
usr/share/staden/etc/alus/HUMTPA-15
usr/share/staden/etc/alus/HUMTPA-16
usr/share/staden/etc/alus/HUMTPA-17
usr/share/staden/etc/alus/HUMTPA-18
usr/share/staden/etc/alus/HUMTPA-19
usr/share/staden/etc/alus/HUMTPA-2
usr/share/staden/etc/alus/HUMTPA-20
usr/share/staden/etc/alus/HUMTPA-21
usr/share/staden/etc/alus/HUMTPA-22
usr/share/staden/etc/alus/HUMTPA-3
usr/share/staden/etc/alus/HUMTPA-4
usr/share/staden/etc/alus/HUMTPA-5
usr/share/staden/etc/alus/HUMTPA-6
usr/share/staden/etc/alus/HUMTPA-7
usr/share/staden/etc/alus/HUMTPA-8
usr/share/staden/etc/alus/HUMTPA-9
usr/share/staden/etc/alus/HUMUG2PD
usr/share/staden/etc/alus/HUMUG2PD-2
usr/share/staden/etc/alus/M11591
usr/share/staden/etc/alus/M12036
usr/share/staden/etc/alus/M12929
usr/share/staden/etc/alus/M13121
usr/share/staden/etc/alus/README
usr/share/staden/etc/alus/consensi
usr/share/staden/etc/alus/fasta-split
usr/share/staden/etc/alus/files
usr/share/staden/etc/alus/filesp
usr/share/staden/etc/blast_data/
usr/share/staden/etc/blast_data/BLOSUM62
usr/share/staden/etc/blast_data/ecoli.nhr
usr/share/staden/etc/blast_data/ecoli.nin
usr/share/staden/etc/blast_data/ecoli.nsq
usr/share/staden/etc/blast_data/gc.val
usr/share/staden/etc/blast_data/seqcode.val
usr/share/staden/etc/cap2rc
usr/share/staden/etc/cap3rc
usr/share/staden/etc/checked.gif
usr/share/staden/etc/config.prefinish
usr/share/staden/etc/copy_readsrc
usr/share/staden/etc/eia.wts
usr/share/staden/etc/emboss_menu
usr/share/staden/etc/fak2rc
usr/share/staden/etc/follow.bitmap
usr/share/staden/etc/gap5rc
usr/share/staden/etc/gap5rc_menu_full
usr/share/staden/etc/gaprc
usr/share/staden/etc/gaprc_menu_full
usr/share/staden/etc/gaprc_menu_mito
usr/share/staden/etc/gcodes/
usr/share/staden/etc/gcodes/code_1
usr/share/staden/etc/gcodes/code_10
usr/share/staden/etc/gcodes/code_11
usr/share/staden/etc/gcodes/code_12
usr/share/staden/etc/gcodes/code_13
usr/share/staden/etc/gcodes/code_14
usr/share/staden/etc/gcodes/code_15
usr/share/staden/etc/gcodes/code_16
usr/share/staden/etc/gcodes/code_2
usr/share/staden/etc/gcodes/code_21
usr/share/staden/etc/gcodes/code_22
usr/share/staden/etc/gcodes/code_23
usr/share/staden/etc/gcodes/code_3
usr/share/staden/etc/gcodes/code_4
usr/share/staden/etc/gcodes/code_5
usr/share/staden/etc/gcodes/code_6
usr/share/staden/etc/gcodes/code_9
usr/share/staden/etc/gcodes/code_index
usr/share/staden/etc/haplorc
usr/share/staden/etc/help_config
usr/share/staden/etc/ied.wts
usr/share/staden/etc/m13mp18_primers
usr/share/staden/etc/niprc
usr/share/staden/etc/nuc_matrix
usr/share/staden/etc/pam250
usr/share/staden/etc/perceptron.wts
usr/share/staden/etc/phraprc
usr/share/staden/etc/prefinishrc
usr/share/staden/etc/pregap4rc
usr/share/staden/etc/prokprom_10.wts
usr/share/staden/etc/prokprom_35.wts
usr/share/staden/etc/renzyme_bairoch
usr/share/staden/etc/shlib.conf
usr/share/staden/etc/siprc
usr/share/staden/etc/spin_embossrc
usr/share/staden/etc/spinrc
usr/share/staden/etc/tk_utilsrc
usr/share/staden/etc/trevrc
usr/share/staden/etc/unchecked.gif
usr/share/staden/etc/vector_primer
usr/share/staden/etc/vectors/
usr/share/staden/etc/vectors/lorist6.seq
usr/share/staden/etc/vectors/m13mp18.seq
usr/share/staden/etc/vectors/pBS.seq
usr/share/staden/etc/vectors/pOTW13.seq
usr/share/staden/etc/vectors/pgem3zfm.seq
usr/share/staden/etc/vectors/pgem3zfp.seq
usr/share/staden/etc/vectors/pgem5zfm.seq
usr/share/staden/etc/vectors/psc194.seq
usr/share/staden/etc/vectors/puc18.seq
usr/share/staden/scripts/
usr/share/staden/scripts/assemble4
usr/share/staden/scripts/fasta-split
usr/share/staden/scripts/fasta2exp
usr/share/staden/scripts/finish_cDNA
usr/share/staden/scripts/finish_cDNA_ends_only
usr/share/staden/scripts/finish_sanger
usr/share/staden/scripts/splitseq_da
usr/share/staden/scripts/staden_help
usr/share/staden/staden.profile
usr/share/staden/tcl/
usr/share/staden/tcl/copy_reads/
usr/share/staden/tcl/copy_reads/copy_reads.tcl
usr/share/staden/tcl/copy_reads/copy_reads_main.tcl
usr/share/staden/tcl/copy_reads/tclIndex
usr/share/staden/tcl/gap/
usr/share/staden/tcl/gap/acd2tag.tcl
usr/share/staden/tcl/gap/alter_rel.tcl
usr/share/staden/tcl/gap/assemble_direct.tcl
usr/share/staden/tcl/gap/auto_assemble.tcl
usr/share/staden/tcl/gap/break_contig.tcl
usr/share/staden/tcl/gap/check_assembly.tcl
usr/share/staden/tcl/gap/clip.tcl
usr/share/staden/tcl/gap/complement.tcl
usr/share/staden/tcl/gap/confidence_graph.tcl
usr/share/staden/tcl/gap/configure.tcl
usr/share/staden/tcl/gap/consen.tcl
usr/share/staden/tcl/gap/consistency_display.tcl
usr/share/staden/tcl/gap/contig_editor.tcl
usr/share/staden/tcl/gap/contig_id.tcl
usr/share/staden/tcl/gap/contig_order.tcl
usr/share/staden/tcl/gap/contig_selector.tcl
usr/share/staden/tcl/gap/dis_readings.tcl
usr/share/staden/tcl/gap/dstrand.tcl
usr/share/staden/tcl/gap/editor_search.tcl
usr/share/staden/tcl/gap/enter_tags.tcl
usr/share/staden/tcl/gap/extract.tcl
usr/share/staden/tcl/gap/fij.tcl
usr/share/staden/tcl/gap/find_oligo.tcl
usr/share/staden/tcl/gap/find_repeats.tcl
usr/share/staden/tcl/gap/gap.tcl
usr/share/staden/tcl/gap/gap_canvas_box.tcl
usr/share/staden/tcl/gap/gap_nav.tcl
usr/share/staden/tcl/gap/gap_prefinish.tcl
usr/share/staden/tcl/gap/gap_restriction_enzymes.tcl
usr/share/staden/tcl/gap/gap_utils.tcl
usr/share/staden/tcl/gap/help_exp.tcl
usr/share/staden/tcl/gap/list_contigs.tcl
usr/share/staden/tcl/gap/list_proc.tcl
usr/share/staden/tcl/gap/ng_fb_cmds.tcl
usr/share/staden/tcl/gap/notes.tcl
usr/share/staden/tcl/gap/oligo_param.tcl
usr/share/staden/tcl/gap/pcr_primers.tcl
usr/share/staden/tcl/gap/preass.tcl
usr/share/staden/tcl/gap/probe.tcl
usr/share/staden/tcl/gap/qual.tcl
usr/share/staden/tcl/gap/quality_plot.tcl
usr/share/staden/tcl/gap/reactions.tcl
usr/share/staden/tcl/gap/reading_coverage.tcl
usr/share/staden/tcl/gap/readpair.tcl
usr/share/staden/tcl/gap/readpair_coverage.tcl
usr/share/staden/tcl/gap/result_manager.tcl
usr/share/staden/tcl/gap/search.tcl
usr/share/staden/tcl/gap/select_contig.tcl
usr/share/staden/tcl/gap/sendto.tcl
usr/share/staden/tcl/gap/show_relationships.tcl
usr/share/staden/tcl/gap/shuffle_pads.tcl
usr/share/staden/tcl/gap/stop_codon.tcl
usr/share/staden/tcl/gap/strand_coverage.tcl
usr/share/staden/tcl/gap/tag_checklist.tcl
usr/share/staden/tcl/gap/tag_editor.tcl
usr/share/staden/tcl/gap/tclIndex
usr/share/staden/tcl/gap/template_display.tcl
usr/share/staden/tcl/gap/trace_display.tcl
usr/share/staden/tcl/gap5/
usr/share/staden/tcl/gap5/acd2tag.tcl
usr/share/staden/tcl/gap5/assemble_single.tcl
usr/share/staden/tcl/gap5/break_contig.tcl
usr/share/staden/tcl/gap5/check_assembly.tcl
usr/share/staden/tcl/gap5/check_database.tcl
usr/share/staden/tcl/gap5/complement.tcl
usr/share/staden/tcl/gap5/configure.tcl
usr/share/staden/tcl/gap5/consen.tcl
usr/share/staden/tcl/gap5/contig_editor.tcl
usr/share/staden/tcl/gap5/contig_extend.tcl
usr/share/staden/tcl/gap5/contig_graph.tcl
usr/share/staden/tcl/gap5/contig_id.tcl
usr/share/staden/tcl/gap5/contig_selector.tcl
usr/share/staden/tcl/gap5/depth.tcl
usr/share/staden/tcl/gap5/dis_readings.tcl
usr/share/staden/tcl/gap5/editor_search.tcl
usr/share/staden/tcl/gap5/export_contigs.tcl
usr/share/staden/tcl/gap5/fij.tcl
usr/share/staden/tcl/gap5/find_oligo.tcl
usr/share/staden/tcl/gap5/find_repeats.tcl
usr/share/staden/tcl/gap5/gap4_compat.tcl
usr/share/staden/tcl/gap5/gap5.tcl
usr/share/staden/tcl/gap5/gap5_cmd.tcl
usr/share/staden/tcl/gap5/gap5_del_test.tcl
usr/share/staden/tcl/gap5/gap5_thrash.tcl
usr/share/staden/tcl/gap5/gap_canvas_box.tcl
usr/share/staden/tcl/gap5/gap_globals.tcl
usr/share/staden/tcl/gap5/gap_restriction_enzymes.tcl
usr/share/staden/tcl/gap5/gap_utils.tcl
usr/share/staden/tcl/gap5/import_contigs.tcl
usr/share/staden/tcl/gap5/import_gff.tcl
usr/share/staden/tcl/gap5/jog.tcl
usr/share/staden/tcl/gap5/libraries.tcl
usr/share/staden/tcl/gap5/list_contigs.tcl
usr/share/staden/tcl/gap5/list_proc.tcl
usr/share/staden/tcl/gap5/map_reads.tcl
usr/share/staden/tcl/gap5/ng_fb_cmds.tcl
usr/share/staden/tcl/gap5/qual.tcl
usr/share/staden/tcl/gap5/readpair.tcl
usr/share/staden/tcl/gap5/replay_log.tcl
usr/share/staden/tcl/gap5/result_manager.tcl
usr/share/staden/tcl/gap5/scaffold.tcl
usr/share/staden/tcl/gap5/search.tcl
usr/share/staden/tcl/gap5/select_contig.tcl
usr/share/staden/tcl/gap5/sendto.tcl
usr/share/staden/tcl/gap5/shuffle_pads.tcl
usr/share/staden/tcl/gap5/tag_checklist.tcl
usr/share/staden/tcl/gap5/tag_editor.tcl
usr/share/staden/tcl/gap5/tclIndex
usr/share/staden/tcl/gap5/trace_display.tcl
usr/share/staden/tcl/haplo/
usr/share/staden/tcl/haplo/haplo.tcl
usr/share/staden/tcl/haplo/tclIndex
usr/share/staden/tcl/prefinish/
usr/share/staden/tcl/prefinish/add_stops.tcl
usr/share/staden/tcl/prefinish/args.template
usr/share/staden/tcl/prefinish/assert.tcl
usr/share/staden/tcl/prefinish/chemistry.tcl
usr/share/staden/tcl/prefinish/config.prefinish
usr/share/staden/tcl/prefinish/fake_insert_sizes.tcl
usr/share/staden/tcl/prefinish/finish.tcl
usr/share/staden/tcl/prefinish/finish_sanger.tcl
usr/share/staden/tcl/prefinish/help
usr/share/staden/tcl/prefinish/hierarchybook.itk
usr/share/staden/tcl/prefinish/param_costs.itcl
usr/share/staden/tcl/prefinish/param_primer3.itcl
usr/share/staden/tcl/prefinish/param_walk.itcl
usr/share/staden/tcl/prefinish/params.itcl
usr/share/staden/tcl/prefinish/pass.itcl
usr/share/staden/tcl/prefinish/prefinish.tcl
usr/share/staden/tcl/prefinish/prefinish_lib.tcl
usr/share/staden/tcl/prefinish/root.itcl
usr/share/staden/tcl/prefinish/rule.itcl
usr/share/staden/tcl/prefinish/rules/
usr/share/staden/tcl/prefinish/rules/chemistry.rule
usr/share/staden/tcl/prefinish/rules/confidence.rule
usr/share/staden/tcl/prefinish/rules/dbl_strand_or_chem.rule
usr/share/staden/tcl/prefinish/rules/double_stranded.rule
usr/share/staden/tcl/prefinish/rules/extend_left.rule
usr/share/staden/tcl/prefinish/rules/extend_right.rule
usr/share/staden/tcl/prefinish/rules/sequence_depth.rule
usr/share/staden/tcl/prefinish/rules/template_depth.rule
usr/share/staden/tcl/prefinish/sanger_names.tcl
usr/share/staden/tcl/prefinish/solution.itcl
usr/share/staden/tcl/prefinish/svec2cvec.tcl
usr/share/staden/tcl/prefinish/tclIndex
usr/share/staden/tcl/prefinish/tooltips.tcl
usr/share/staden/tcl/prefinish/tree.itcl
usr/share/staden/tcl/prefinish/xscrolledframe.itk
usr/share/staden/tcl/pregap4/
usr/share/staden/tcl/pregap4/config_files.tcl
usr/share/staden/tcl/pregap4/conversions.tcl
usr/share/staden/tcl/pregap4/edit_exp.tcl
usr/share/staden/tcl/pregap4/gui.tcl
usr/share/staden/tcl/pregap4/images.tcl
usr/share/staden/tcl/pregap4/modules.tcl
usr/share/staden/tcl/pregap4/modules/
usr/share/staden/tcl/pregap4/modules/atqa.p4m
usr/share/staden/tcl/pregap4/modules/augment_exp.p4m
usr/share/staden/tcl/pregap4/modules/blast.p4m
usr/share/staden/tcl/pregap4/modules/cap2_assemble.p4m
usr/share/staden/tcl/pregap4/modules/cap3_assemble.p4m
usr/share/staden/tcl/pregap4/modules/cap3old_assemble.p4m
usr/share/staden/tcl/pregap4/modules/cloning_vector_clip.p4m
usr/share/staden/tcl/pregap4/modules/compress_trace.p4m
usr/share/staden/tcl/pregap4/modules/convert_trace.p4m
usr/share/staden/tcl/pregap4/modules/cross_match_svec.p4m
usr/share/staden/tcl/pregap4/modules/eba.p4m
usr/share/staden/tcl/pregap4/modules/email.p4m
usr/share/staden/tcl/pregap4/modules/enter_assembly.p4m
usr/share/staden/tcl/pregap4/modules/extract_seq.p4m
usr/share/staden/tcl/pregap4/modules/fakii_assemble.p4m
usr/share/staden/tcl/pregap4/modules/gap4_assemble.p4m
usr/share/staden/tcl/pregap4/modules/hetins.p4m
usr/share/staden/tcl/pregap4/modules/init.p4m
usr/share/staden/tcl/pregap4/modules/init_exp.p4m
usr/share/staden/tcl/pregap4/modules/interactive_clip.p4m
usr/share/staden/tcl/pregap4/modules/mutscan.p4m
usr/share/staden/tcl/pregap4/modules/old_cloning_vector_clip.p4m
usr/share/staden/tcl/pregap4/modules/old_phrap_assemble.p4m
usr/share/staden/tcl/pregap4/modules/phrap_assemble.p4m
usr/share/staden/tcl/pregap4/modules/phred.p4m
usr/share/staden/tcl/pregap4/modules/polyA.p4m
usr/share/staden/tcl/pregap4/modules/quality_clip.p4m
usr/share/staden/tcl/pregap4/modules/reference.p4m
usr/share/staden/tcl/pregap4/modules/repeat_masker.p4m
usr/share/staden/tcl/pregap4/modules/screen_seq.p4m
usr/share/staden/tcl/pregap4/modules/screen_vector.p4m
usr/share/staden/tcl/pregap4/modules/sequence_vector_clip.p4m
usr/share/staden/tcl/pregap4/modules/shutdown.p4m
usr/share/staden/tcl/pregap4/modules/to_scf.p4m
usr/share/staden/tcl/pregap4/modules/trace_clip.p4m
usr/share/staden/tcl/pregap4/modules/trace_diff.p4m
usr/share/staden/tcl/pregap4/modules/tracediff.p4m
usr/share/staden/tcl/pregap4/modules/uncalled_clip.p4m
usr/share/staden/tcl/pregap4/modules/update_biolims.p4m
usr/share/staden/tcl/pregap4/name_scheme.tcl
usr/share/staden/tcl/pregap4/naming_schemes/
usr/share/staden/tcl/pregap4/naming_schemes/mutation_detection.p4t
usr/share/staden/tcl/pregap4/naming_schemes/sanger_names_new.p4t
usr/share/staden/tcl/pregap4/naming_schemes/sanger_names_old.p4t
usr/share/staden/tcl/pregap4/pregap4.tcl
usr/share/staden/tcl/pregap4/query_files.tcl
usr/share/staden/tcl/pregap4/tclIndex
usr/share/staden/tcl/pregap4/templates.tcl
usr/share/staden/tcl/pregap4/unix_database.tcl
usr/share/staden/tcl/pregap4/utils.tcl
usr/share/staden/tcl/pregap4/widget.tcl
usr/share/staden/tcl/pregap4/widget_licence
usr/share/staden/tcl/pregap4/xcheck.tcl
usr/share/staden/tcl/spin/
usr/share/staden/tcl/spin/base_comp.tcl
usr/share/staden/tcl/spin/comborange.tcl
usr/share/staden/tcl/spin/dot_raster.tcl
usr/share/staden/tcl/spin/gap_canvas_box.tcl
usr/share/staden/tcl/spin/gene_search.tcl
usr/share/staden/tcl/spin/graph_raster.tcl
usr/share/staden/tcl/spin/keybox.tcl
usr/share/staden/tcl/spin/nip_canvas_box.tcl
usr/share/staden/tcl/spin/nip_codon_content.tcl
usr/share/staden/tcl/spin/nip_dinuc_freq.tcl
usr/share/staden/tcl/spin/nip_genetic_code.tcl
usr/share/staden/tcl/spin/nip_open_reading_frames.tcl
usr/share/staden/tcl/spin/nip_restriction_enzymes.tcl
usr/share/staden/tcl/spin/nip_sendto.tcl
usr/share/staden/tcl/spin/nip_stop_codon.tcl
usr/share/staden/tcl/spin/nip_string_search.tcl
usr/share/staden/tcl/spin/nip_translation.tcl
usr/share/staden/tcl/spin/nip_wtmatrix_search.tcl
usr/share/staden/tcl/spin/rescan_matches.tcl
usr/share/staden/tcl/spin/seq_id.tcl
usr/share/staden/tcl/spin/seq_raster.tcl
usr/share/staden/tcl/spin/seq_result_manager.tcl
usr/share/staden/tcl/spin/seqed.tcl
usr/share/staden/tcl/spin/seqed_search.tcl
usr/share/staden/tcl/spin/sequence_browser.tcl
usr/share/staden/tcl/spin/sequence_manager.tcl
usr/share/staden/tcl/spin/sequence_pair_display.tcl
usr/share/staden/tcl/spin/set_alignment_symbols.tcl
usr/share/staden/tcl/spin/sip_align.tcl
usr/share/staden/tcl/spin/sip_config.tcl
usr/share/staden/tcl/spin/sip_find_identity.tcl
usr/share/staden/tcl/spin/sip_options.tcl
usr/share/staden/tcl/spin/sip_quick_scan.tcl
usr/share/staden/tcl/spin/sip_sendto.tcl
usr/share/staden/tcl/spin/sip_sim.tcl
usr/share/staden/tcl/spin/sip_similar_spans.tcl
usr/share/staden/tcl/spin/spin.tcl
usr/share/staden/tcl/spin/splice_search.tcl
usr/share/staden/tcl/spin/strand.tcl
usr/share/staden/tcl/spin/tclIndex
usr/share/staden/tcl/spin/trna_search.tcl
usr/share/staden/tcl/spin_emboss/
usr/share/staden/tcl/spin_emboss/acd2tcl.tcl
usr/share/staden/tcl/spin_emboss/create_emboss_files.tcl
usr/share/staden/tcl/spin_emboss/disp_menu.tcl
usr/share/staden/tcl/spin_emboss/emboss.tcl
usr/share/staden/tcl/spin_emboss/emboss_utils.tcl
usr/share/staden/tcl/spin_emboss/tclIndex
usr/share/staden/tcl/spin_emboss/xget_fname.tcl
usr/share/staden/tcl/tk_utils/
usr/share/staden/tcl/tk_utils/assert.tcl
usr/share/staden/tcl/tk_utils/biolimsbox.tcl
usr/share/staden/tcl/tk_utils/buttonbox.tcl
usr/share/staden/tcl/tk_utils/canvas_box.tcl
usr/share/staden/tcl/tk_utils/checkbutton.tcl
usr/share/staden/tcl/tk_utils/colour_selector_box.tcl
usr/share/staden/tcl/tk_utils/config.tcl
usr/share/staden/tcl/tk_utils/console.tcl
usr/share/staden/tcl/tk_utils/container.tcl
usr/share/staden/tcl/tk_utils/element_canvas.tcl
usr/share/staden/tcl/tk_utils/entrybox.tcl
usr/share/staden/tcl/tk_utils/exp_file.tcl
usr/share/staden/tcl/tk_utils/file_checking.tcl
usr/share/staden/tcl/tk_utils/filebrowser.tcl
usr/share/staden/tcl/tk_utils/func_edit.tcl
usr/share/staden/tcl/tk_utils/grid.tcl
usr/share/staden/tcl/tk_utils/help.tcl
usr/share/staden/tcl/tk_utils/help_choose.tcl
usr/share/staden/tcl/tk_utils/help_ext.tcl
usr/share/staden/tcl/tk_utils/help_galeon.tcl
usr/share/staden/tcl/tk_utils/help_int.tcl
usr/share/staden/tcl/tk_utils/help_macosx.tcl
usr/share/staden/tcl/tk_utils/help_netscape.tcl
usr/share/staden/tcl/tk_utils/help_windows.tcl
usr/share/staden/tcl/tk_utils/html_library.tcl
usr/share/staden/tcl/tk_utils/images.tcl
usr/share/staden/tcl/tk_utils/init.tcl
usr/share/staden/tcl/tk_utils/licence.tcl
usr/share/staden/tcl/tk_utils/list_or_file.tcl
usr/share/staden/tcl/tk_utils/menu.tcl
usr/share/staden/tcl/tk_utils/messagebox.tcl
usr/share/staden/tcl/tk_utils/r_enzyme_box.tcl
usr/share/staden/tcl/tk_utils/radiobutton.tcl
usr/share/staden/tcl/tk_utils/repeater.tcl
usr/share/staden/tcl/tk_utils/restriction_enzyme_map.tcl
usr/share/staden/tcl/tk_utils/scale_range.tcl
usr/share/staden/tcl/tk_utils/scalebox.tcl
usr/share/staden/tcl/tk_utils/search.tcl
usr/share/staden/tcl/tk_utils/tabnotebook.tcl
usr/share/staden/tcl/tk_utils/tclIndex
usr/share/staden/tcl/tk_utils/text_output.tcl
usr/share/staden/tcl/tk_utils/user_defaults.tcl
usr/share/staden/tcl/tk_utils/utils.tcl
usr/share/staden/tcl/tk_utils/widget.tcl
usr/share/staden/tcl/tk_utils/xcombobox.tcl
usr/share/staden/tcl/tk_utils/xentry.tcl
usr/share/staden/tcl/tk_utils/xfilebrowser.tcl
usr/share/staden/tcl/tk_utils/xget_fname.tcl
usr/share/staden/tcl/tk_utils/xlabel.tcl
usr/share/staden/tcl/tk_utils/xlistnotebook.tcl
usr/share/staden/tcl/tk_utils/xmclistbox.tcl
usr/share/staden/tcl/tk_utils/xmenubutton.tcl
usr/share/staden/tcl/tk_utils/xradiobox.tcl
usr/share/staden/tcl/tk_utils/xscrolledlistbox.tcl
usr/share/staden/tcl/tk_utils/xscrolledtext.tcl
usr/share/staden/tcl/tk_utils/xspinbox.tcl
usr/share/staden/tcl/tk_utils/xtoplevel.tcl
usr/share/staden/tcl/tk_utils/xtwinspin.tcl
usr/share/staden/tcl/tk_utils/xyesno.tcl
usr/share/staden/tcl/tk_utils/yesno.tcl
usr/share/staden/tcl/trev/
usr/share/staden/tcl/trev/trev.tcl
